Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs2258422 chr13:114158620 T/C 3.85E-12 178 24.23 29.57 3.32 KM Plot
PCPG rs2258511 chr13:114160151 C/G 4.56E-12 177 24.23 29.95 3.32 KM Plot
PCPG rs2258517 chr13:114164934 C/A 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258520 chr13:114164912 A/G 3.99E-12 178 3.32 30.33 24.23 KM Plot
PCPG rs2258521 chr13:114164843 A/G 3.6E-12 178 24.1 29.57 3.32 KM Plot
PCPG rs2258575 chr13:114161262 T/C 0.000389 178 24.1 29.5 3.7 KM Plot
PCPG rs2258578 chr13:114161464 G/A 4.54E-12 177 24.1 29.95 3.32 KM Plot
PCPG rs2258579 chr13:114161465 G/A 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258628 chr13:114161819 G/A 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258629 chr13:114161875 C/T 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258633 chr13:114162033 T/C 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258678 chr13:114162722 A/G 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258680 chr13:114162635 A/G 3.85E-12 178 3.32 29.57 24.23 KM Plot
PCPG rs2258682 chr13:114162594 A/G 3.87E-12 178 24.17 29.95 3.32 KM Plot
PCPG rs2258683 chr13:114162579 C/T 3.87E-12 178 24.17 29.95 3.32 KM Plot